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Fig. 2 | BMC Zoology

Fig. 2

From: Influence of Pleistocene climate fluctuations on the demographic history and distribution of the critically endangered Chinese pangolin (Manis pentadactyla)

Fig. 2

Demographic history of the studied Chinese pangolin subpopulations. a PSMC estimate based on the de novo assembly, and population genomic estimates from (b) MSMC2, (c) STAIRWAY PLOT and (d) BSP based on 10 whole mitochondrial genomes across four time periods: the current time, the Mid-Holocene (MH; 7.5–5 ka), the last glacial maximum (LGM; approximately 21 ka) and the last interglacial (LIG; approximately 140–120 ka). The thick dark green line in (d) indicates the average estimated trajectory, while the light green lines indicate the 90% credibility interval. (e) Split time inferred by MSMC2 between the GDA and GDB subpopulations. (f) Reconstruction of past variations in the GDA subpopulation in Ne and split time between GDA and GDB subpopulations inferred by SMC +  + . The detailed information in each dataset used in those analysis is described in Table S5

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BMC Zoology

ISSN: 2056-3132

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