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Table 3 Branch site tests for proteins undergoing positive selection

From: Natural selection in bats with historical exposure to white-nose syndrome

Gene/Foreground branch n foreground ind. 2ΔlnL p
acp5
Eptesicus fuscus 1 73 0.001
Eptesicus nilssonii 1 27.5 0.001
Myotis davidii 1 0.7 1.000
Myotis myotis 5 0.7 1.000
Myotis brandtii 1 0.0 1.000
Barbastella barbastellus 4 0.0 1.000
Myotis emarginatus 8 0.0 1.000
Myotis lucifugus 5 −0.7 1.000
anxa1
Myotis davidii 1 8.1 0.153
Myotis emarginatus 4 8.1 0.153
Myotis brandtii 1 3.1 1.000
Eptesicus fuscus 1 3.1 1.000
Neoromicia nana 1 1.9 1.000
Eptesicus nilssonii 2 0.0 1.000
Myotis lucifugus 1 0.0 1.000
Myotis myotis 4 0.0 1.000
Pipistrellus pipistrellus 1 −1.8 1.000
aqp3
Eptesicus fuscus 1 0.9 1.000
Myotis myotis 4 0.8 1.000
Eptesicus nilssoni 2 0.0 1.000
Myotis brandtii 1 0.0 1.000
Myotis davidii 1 0.0 1.000
Myotis emarginatus 11 0.0 1.000
Myotis lucifugus 1 0.0 1.000
Neoromicia nana 4 0.0 1.000
Pipistrellus pipistrellus 3 0.0 1.000
bcam
Eptesicus fuscus 1 0.1 1.000
Myotis brandtii 1 0.0 1.000
Myotis davidii 1 0.0 1.000
Myotis emarginatus 1 0.0 1.000
Myotis lucifugus 2 0.0 1.000
Pipistellus pipistrellus 2 0.0 1.000
lrp4
Eptesicus fuscus 1 0.7 1.000
Myotis lucifugus 1 0.2 1.000
Myotis brandtii 1 0.0 1.000
Myotis davidii 1 0.0 1.000
ptch2
Eptesicus fuscus 1 0.7 1.000
Myotis lucifugus 1 0.2 1.000
Myotis brandtii 1 0.0 1.000
Myotis davidii 1 0.0 1.000
sncg
Myotis davidii 1 0.8 1.000
Eptesicus fuscus 1 0.0 1.000
Myotis brandtii 1 0.0 1.000
  1. Proteins were tested for positive selection using the likelihood ratio test (A-model as alternative hypothesis and A1-model with ω = 1 as null hypothesis). p-values (FDR corrected; significant at α = 0.05) indicating signals of natural selection are marked in bold