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Table 2 Bat amino acid sites under selection

From: Natural selection in bats with historical exposure to white-nose syndrome

 

M1-M2

M7-M8

Gene

pos

aa

p

mean

SE

pos

aa

p

mean

SE

acp5

98

S/A

0.003

6.542

1.424

98

S/A

0.0001

7.299

1.384

XP_006104612.1

125

G/R/K

0.0001

6.559

1.394

125

G/R/K

0.0001

7.304

1.372

 

145

R/Q

0.0001

6.557

1.396

145

R/Q

0.0001

7.304

1.373

 

223

Q/R

0.017

6.454

1.554

223

Q/R

0.006

7.261

1.461

anxa1

17

E/Q

0.024

8.227

1.718

17

E/Q

0.002

7.841

1.296

XP_014396764.1

     

20

E/K

0.009

7.792

1.410

 

22

T/M/V/I

0.0001

8.420

1.297

22

T/M

0.0001

7.857

1.255

 

23

K/N

0.0001

8.420

1.299

23

K/N

0.0001

7.857

1.255

 

25

I/V

0.020

8.261

1.653

25

I/V

0.002

7.842

1.318

 

27

G/A/T

0.0001

8.420

1.297

27

G/A/T

0.0001

7.857

1.255

 

34

P/S

0.002

8.403

1.345

34

P/S

0.0001

7.856

1.259

 

55

I/V

0.012

8.325

1.526

55

I/V

0.002

7.846

1.285

aqp3

XP_006758647.1

128

L/W

0.001

8.693

1.604

128

L/W

0.0001

8.027

1.895

bcam

     

365

N/D

0.038

6.850

1.934

XP_015416692.1

     

407

V/I

0.012

7.019

1.678

      

431

S/V/P

0.008

7.046

1.628

      

434

I/L

0.013

7.013

1.690

      

440

F/H

0.035

6.866

1.902

      

523

S/P

0.009

7.040

1.641

ptch2

     

3

R/G/H

0.028

2.806

1.006

XP_014319265.1

1155

T/S/A

0.046

4.57

1.778

1155

T/S/A

 

2.842

0.963

  1. Amino acid sites under positive selection were analysed using Bayes empirical Bayes. Position (pos) refers to the position of an amino acid (aa) mapped against the reference sequence stated in the table. The calculation is based on both M1-M2 and M7-M8 comparisons and shows the M1–M2 comparison as more strict