Table 2 Genome assembly statistics for C. monodelphis sp. n. and other Caenorhabditis species
Species | C. monodelphis | C. brenneri | C. briggsae | C. elegans | C. japonica | C. remanei | C. sinica | C. tropicalis |
|---|---|---|---|---|---|---|---|---|
Version | 1.0 | WS254 | WS254 | WS254 | WS254 | WS254 | WS254 | WS254 |
Mating type | gonochoristic | gonochoristic | hermaphroditic | hermaphroditic | gonochoristic | gonochoristic | gonochoristic | hermaphroditic |
Strain | JU1667 | PB2801 | AF16 | N2 | DF5081 | PB4641 | JU800 | JU1373 |
Span (Mb) | 115.12 | 190.37 | 108.38 | 100.29 | 166.25 | 118.55 | 130.76 | 79.32 |
Scaffolds (n)a | 6,864 | 3,305 | 367 | 7 | 18,808 | 1,591 | 11,966 | 660 |
N50 (kb) | 49.4 | 381.96 | 17,485.44 | 17,493.82 | 94.15 | 1,522.09 | 25,564 | 20,921.87 |
Genes (n) | 17,180 | 30,660 | 21,814 | 20,362 | 29,964 | 26,226 | 34,696 | 22,326 |
GC (%) | 43.9 | 38.6 | 37.4 | 35.4 | 39.2 | 37.9 | 39.5 | 37.7 |
CEGMA complete/partial (%) | 89.11/ 97.98 | 98.39/ 99.60 | 97.98/ 99.19 | 96.77/ 99.19 | 78.63/ 97.18 | 94.35/ 98.79 | 95.56/ 99.60 | 97.18/ 98.79 |