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Table 2 Estimates of sequence divergence across the mitogenomes between teydea (N = 21) and polatzeki (N = 4) Blue Chaffinches

From: Species-level divergences in multiple functional traits between the two endemic subspecies of Blue Chaffinches Fringilla teydea in Canary Islands

  Nucleotides Amino acids
Genes Sequence Divergence (%) Sequence Divergence (%)
12S 975 0.619 ± 0.254 - -
16S 1598 0.695 ± 0.194 - -
NAD1 973 2.530 ± 0.813 324 0.933 ± 0.475
NAD2 1038 2.725 ± 0.467 346 1.752 ± 0.711
COI 1548 1.968 ± 0.552 516 0.134 ± 0.097
COII 675 2.813 ± 0.814 225 0.893 ± 0.647
ATP8 168 3.776 ± 1.673 55 3.707 ± 2.547
ATP6 680 2.754 ± 0.609 226 0.443 ± 0.378
COIII 784 2.221 ± 0.829 261 1.046 ± 0.592
NAD3 342 3.194 ± 0.994 114 2.032 ± 1.226
NAD4I 290 2.125 ± 0.782 96 1.047 ± 1.006
NAD4 1369 1.955 ± 0.747 456 0.251 ± 0.024
NAD5 1816 3.155 ± 1.075 605 2.172 ± 0.656
Cyt b 1144 2.147 ± 0.602 380 1.058 ± 0.551
NAD6 518 3.427 ± 0.939 171 1.051 ± 0.737
CR 1311 2.944 ± 0.715 - -
Whole mitogenome 16788 2.309 ± 0.716 - -
Synonymous substitutionsa    3523 8.072 ± 0.522
Nonsynonymous substitutionsa    3523 0.950 ± 0.133
  1. aNAD6 excluded
  2. Divergences (mean ± SE) were calculated as the percentage of substitutions per site (nucleotide or amino acid) from averaging over all individual pair combinations between taxa. All ambiguous positions were excluded for each sequence pair. SE of the mean was calculated by a bootstrap procedure with 100 replicates